Comparison of kNN and k-means optimization methods of reference set selection for improved CNV callers performance

Abstract:

There are over 25 tools dedicated for the detection of Copy Number Variants (CNVs) using Whole Exome Sequencing (WES) data based on read depth analysis.

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BibTeX:

 {%raw%}@article{Kusmirek2019,
  author = {Kusmirek, Wiktor and Szmurlo, Agnieszka and Wiewiorka, Marek and Nowak, Robert and Gambin, Tomasz},
  doi = {10.1186/s12859-019-2889-z},
  issn = {1471-2105},
  journal = {BMC Bioinformatics},
  number = {1},
  pages = {266},
  title = {Comparison of kNN and k-means optimization methods of reference set selection for improved CNV callers performance},
  url = {https://doi.org/10.1186/s12859-019-2889-z},
  volume = {20},
  year = {2019},
  public = {yes}
}
{%endraw%}